Disaster Epidemiology and Emergency Surveillance Training Course

Duration 10 days 19 modules · 65 contact hours
Level Intermediate Certificate on completion
Who attends Public Health Officers, Epidemiologists and others
Fee from USD 2,200 KSh 190,000 for Kenyan organisations
Where 52 cities + online See dates by city
Next start 16 Nov 2026 Course code SD-PH-047

Before you join: Participants should have basic public health knowledge and experience working with routine health data, disease reporting, health programmes or emergency operations.

Dates & prices

Two start dates a month in every city, and live online on weekdays or weekends. Fees are per participant; classroom fees include tuition, materials, lunch and refreshments, and the certificate.

Suggest a date or city

Showing the next six months. Later dates, other cities and private deliveries for your team are available on request.

Course overview

Disasters create urgent public health decisions with incomplete, changing and sometimes contradictory information. Health authorities and responding agencies must rapidly estimate population needs, detect outbreaks, monitor mortality and service disruption, and communicate findings that guide resource allocation. Poor surveillance design can produce delayed alerts, duplicate reporting, misleading denominators and response actions that do not match the greatest risks.

This course develops the practical epidemiology and surveillance skills required during sudden-onset disasters, disease outbreaks, displacement crises and other public health emergencies. Participants learn to define surveillance objectives, establish case definitions, select indicators, calculate core epidemiological measures, design reporting flows, assess data quality and interpret early warning signals. The programme covers rapid health assessments, mortality surveillance, communicable disease surveillance, event-based surveillance, outbreak investigation, risk assessment and operational reporting. Participants apply WHO Early Warning, Alert and Response Network principles, Integrated Disease Surveillance and Response methods, International Health Regulations requirements and selected Sphere standards.

Teaching combines focused technical briefings with disaster cases, surveillance data reviews, group design work, reporting simulations and structured peer critique. Participants progressively build a surveillance package for a realistic emergency scenario, beginning with an initial assessment and continuing through indicator design, alert management, data analysis and response reporting. They leave with a completed emergency surveillance plan, reporting tools, case definitions, indicator reference sheets, an alert investigation workflow and a situation report model that can be adapted for their own agency or jurisdiction.

The course is suited to public health professionals who contribute to emergency preparedness, health information management, outbreak response, humanitarian operations or emergency coordination. It is particularly relevant where staff must translate field data into timely decisions for incident managers, health clusters, district authorities and partner organisations.

What you will be able to do

  • Design an emergency surveillance system using objectives, indicators, reporting flows and response thresholds
  • Conduct rapid health assessments using population, mortality, morbidity and service-availability data
  • Calculate attack rates, incidence, prevalence, crude mortality rates and proportional morbidity
  • Develop standard case definitions and line-listing tools for priority epidemic-prone conditions
  • Apply EWARN and IDSR methods to detect, verify and manage public health alerts
  • Analyse surveillance data using epidemic curves, spot maps, tables and alert thresholds
  • Produce evidence-based situation reports and risk communications for incident management decisions
  • Present a complete emergency surveillance plan for a defined disaster response scenario

Benefits of attending

For you

  • Build confidence interpreting incomplete emergency health data under operational time pressure
  • Produce surveillance reports that support defensible prioritisation and resource requests
  • Recognise outbreak signals earlier through structured alert verification and threshold methods
  • Contribute effectively to health cluster, incident management and outbreak coordination meetings
  • Develop reusable surveillance tools for deployment, district response or preparedness planning

For your organisation

  • Improve early detection of epidemic-prone diseases and unusual health events
  • Strengthen consistency of case reporting across facilities, partners and mobile teams
  • Reduce decision delays through clearer indicators, thresholds and reporting responsibilities
  • Improve data quality for emergency resource allocation, donor reporting and coordination
  • Create deployable surveillance plans aligned with recognised emergency public health methods

Course modules

19 modules over 10 days

Participants can distinguish disaster epidemiology functions and define surveillance priorities during an emergency.

  • Disaster epidemiology functions: assessment, surveillance, investigation, evaluation and communication
  • Public health consequences of earthquakes, floods, conflict and population displacement
  • Hazard, exposure, vulnerability and capacity within emergency risk assessment
  • Emergency phases and changing information requirements from onset through recovery
  • Incident management structures and public health decision-making responsibilities
  • Surveillance objectives linked to immediate life-saving response decisions

Participants can design the core architecture of an emergency surveillance system.

  • Surveillance system components: sources, collection, analysis, dissemination and response
  • Indicator-based surveillance compared with event-based surveillance approaches
  • Passive, active, sentinel and community-based surveillance system choices
  • Select surveillance objectives using priority risks and operational decisions
  • Reporting chains from community informants to incident management teams
  • Data flow diagrams identifying handovers, delays and accountability points

Participants can plan and interpret a rapid health assessment for an affected population.

  • Rapid health assessment objectives during the first 72 hours
  • Secondary data review using census, facility, hazard and displacement records
  • SMART sampling principles for population-based emergency assessments
  • Key informant interviews structured around health risks and service disruption
  • Facility assessments covering staffing, supplies, functionality and referral capacity
  • Prioritisation matrices combining severity, scale, trend and response capacity

Participants can calculate and interpret measures used in emergency health surveillance.

  • Population estimation methods for camps, host communities and mobile populations
  • Person-time, population-at-risk and denominator selection for emergency rates
  • Calculate cumulative incidence, incidence rate, prevalence and attack rate
  • Crude mortality rate and under-five mortality rate calculations
  • Proportional morbidity tables for identifying dominant reported conditions
  • Interpret denominators affected by displacement, access barriers and registration gaps

Participants can create standard case definitions and practical reporting instruments.

  • Standard case definition components: clinical criteria, laboratory criteria and epidemiological links
  • Suspected, probable and confirmed case classifications for emergency reporting
  • Create syndrome definitions where laboratory confirmation is unavailable
  • Line-list design for person, place, time and outcome variables
  • Weekly aggregate reporting forms for priority conditions and deaths
  • Data dictionaries specifying variables, codes, validation rules and ownership

Participants can select and monitor priority diseases based on emergency risk profiles.

  • Prioritise epidemic-prone diseases using transmission, severity and control feasibility
  • Cholera surveillance indicators: acute watery diarrhoea, dehydration and deaths
  • Measles surveillance using fever, rash and immunisation status
  • Acute jaundice syndrome reporting for hepatitis outbreak detection
  • Malaria, dengue and vector-borne disease surveillance after disasters
  • Vaccine-preventable disease indicators linked to immunisation response planning

Participants can apply EWARN and IDSR principles to emergency disease reporting.

  • WHO EWARN objectives, minimum datasets and reporting frequency
  • IDSR functions for detection, reporting, analysis, investigation and feedback
  • Zero reporting procedures for high-priority epidemic-prone conditions
  • Immediate notification criteria for unusual public health events
  • Alert lists and weekly reporting schedules for participating facilities
  • Feedback bulletins that improve reporting completeness and clinical recognition

Participants can establish event-based reporting channels and verification procedures.

  • Event-based surveillance signals from rumours, media, hotlines and community reports
  • Community-based surveillance roles for volunteers, leaders and health workers
  • Signal triage using relevance, credibility, urgency and potential impact
  • Rumour logs recording source, event, location, verification and disposition
  • Verification interviews that protect confidentiality and avoid harmful speculation
  • Escalation criteria for clusters, deaths, exposures and unusual syndromes

Participants can assess surveillance data quality and manage sensitive information responsibly.

  • Completeness, timeliness, accuracy, consistency and representativeness quality dimensions
  • Routine data quality assessment using source-document verification and recounts
  • Duplicate detection using identifiers, dates, locations and clinical variables
  • Missing-data analysis distinguishing reporting failure from true zero counts
  • Confidentiality controls for line lists, case investigation forms and reports
  • Data access rules, retention schedules and secure file transfer procedures

Participants can analyse emergency surveillance data by person, place and time.

  • Person analysis using age, sex, occupation, displacement and risk factors
  • Place analysis through facility catchments, settlements, camps and administrative areas
  • Time analysis using daily counts, weekly trends and epidemic curves
  • Construct epidemic curves by date of onset and reporting date
  • Spot maps identifying geographic clustering, access barriers and exposure patterns
  • Rate comparisons using appropriate denominators and population subgroups

Participants can establish alert thresholds and interpret signals requiring action.

  • Alert thresholds based on absolute counts, rates and expected baselines
  • Cumulative sum methods for detecting departures from historical patterns
  • Moving averages and seasonal baselines for routine surveillance comparison
  • Interpret threshold breaches alongside reporting completeness and case definition changes
  • Alert verification decisions considering severity, transmissibility and population vulnerability
  • Document alert status from signal receipt through closure

Participants can organise an outbreak investigation while maintaining response operations.

  • Outbreak investigation steps adapted for insecure and resource-limited settings
  • Verify diagnosis, confirm outbreak existence and establish case definitions
  • Develop descriptive hypotheses from person, place and time patterns
  • Analytical study choices: cohort studies, case-control studies and environmental sampling
  • Calculate risk ratios, odds ratios and attributable risk
  • Control measures initiated before investigation completion when risks are severe

Participants can monitor mortality, service disruption and health-system performance during emergencies.

  • Mortality surveillance sources: facilities, burial sites, communities and registration systems
  • Verbal autopsy principles for deaths outside health facilities
  • Excess mortality estimation against pre-emergency mortality baselines
  • Health facility utilisation indicators: consultations, admissions, referrals and bed occupancy
  • Service availability monitoring for essential medicines, staff and electricity
  • Interpret declining attendance alongside access constraints and population movement

Participants can integrate laboratory, environmental and clinical information for response decisions.

  • Specimen referral pathways from peripheral sites to reference laboratories
  • Laboratory turnaround times and their effect on case classification
  • Environmental sampling for water quality, vectors and contamination hazards
  • Chain-of-custody records for specimens and environmental samples
  • Link laboratory results with line lists and outbreak databases
  • Interpret negative tests considering sample timing, quality and test sensitivity

Participants can assess public health risks and recommend proportionate response actions.

  • WHO risk assessment dimensions: hazard, exposure, vulnerability and capacity
  • Risk matrices ranking likelihood, impact, uncertainty and urgency
  • Scenario planning for disease spread, displacement and service interruption
  • Identify populations requiring targeted surveillance and protective measures
  • Response triggers linking risk levels to predefined operational actions
  • Document assumptions, evidence gaps and confidence in risk judgements

Participants can prepare decision-focused surveillance products for emergency coordination structures.

  • Situation report structure: key findings, actions, gaps and priorities
  • Select tables showing cases, deaths, rates and reporting completeness
  • Design epidemic curves with clear scales, labels and annotation
  • Maps communicating affected locations, service gaps and response coverage
  • Interpret findings without overstating causality or data certainty
  • Recommendation writing tied to evidence, responsibility and response timelines

Participants can coordinate surveillance partners and communicate findings ethically during emergencies.

  • Health cluster information roles, reporting agreements and partner coordination
  • Incident action plans connecting surveillance findings to operational objectives
  • Risk communication principles: timeliness, transparency, empathy and uncertainty
  • Community feedback mechanisms for rumours, concerns and protective behaviours
  • Ethical surveillance principles: necessity, proportionality, privacy and non-discrimination
  • Cross-border reporting responsibilities under International Health Regulations

Participants can develop preparedness measures that enable rapid surveillance activation.

  • Surveillance readiness assessments covering people, tools, systems and partnerships
  • Pre-approved case definitions, forms and reporting channel arrangements
  • Training plans for facility staff, community informants and supervisors
  • Stock lists for registers, communication devices and specimen materials
  • Simulation objectives testing alerts, escalation, reporting and decision-making
  • After-action review methods converting response lessons into improvement actions

Participants can build, review and present a complete emergency surveillance plan for a defined disaster scenario.

  • Define scenario-specific surveillance objectives, populations, risks and decision users
  • Specify priority conditions, case definitions, indicators and reporting frequency
  • Map reporting pathways, data responsibilities, quality checks and escalation points
  • Set alert thresholds, verification procedures and outbreak investigation triggers
  • Prepare situation report outputs, visualisations and recommendation formats
  • Review plan feasibility against staffing, communications, security and laboratory constraints

Exercises and examples are adapted to each cohort's sectors and roles.

What you take back to work

  1. Emergency surveillance plan template
  2. Rapid health assessment toolkit
  3. Priority disease case definition library
  4. EWARN alert verification workflow
  5. Surveillance indicator reference sheet
  6. Emergency situation report template

Who should attend

  • Public Health Officers — responsible for surveillance, outbreak control or emergency health reporting
  • Epidemiologists — needing operational methods for disaster and humanitarian response settings
  • Health Information Managers — designing reporting systems and assuring emergency data quality
  • Emergency Preparedness Coordinators — preparing surveillance arrangements before incidents occur
  • Humanitarian Health Programme Managers — using field evidence to direct services and supplies
  • Laboratory and Disease Control Officers — linking case reporting, confirmation and response actions

Skills and tools covered

Emergency surveillance designRapid health assessmentOutbreak signal detectionMortality monitoringSurveillance data analysisEmergency reporting

Tools and standards

WHO Early Warning, Alert and Response Network, Integrated Disease Surveillance and Response, International Health Regulations (2005), Sphere Handbook

How the course runs

Training methodology

The course uses short technical briefings followed by case-based analysis, facilitated group work, spreadsheet calculations, reporting simulations and structured application planning. Participants work with realistic disaster datasets covering displacement, diarrhoeal disease, measles, trauma, mortality and disrupted health services. Trainers demonstrate methods before participants use templates to design surveillance components for a selected scenario. Peer review sessions test whether indicators, thresholds, case definitions and reporting products can support timely operational decisions. The final capstone integrates work developed throughout the programme.

Requirements and prerequisites

Participants should have basic public health knowledge and experience working with routine health data, disease reporting, health programmes or emergency operations. Familiarity with simple percentages, rates and spreadsheet tables is useful. Participants should understand common communicable disease terms such as case definition, outbreak, incubation period and transmission route. Prior field deployment, advanced epidemiology training, statistical software expertise and laboratory training are not required. The course explains calculations and surveillance methods before participants apply them to emergency cases.

A typical training day

08:30 – 10:30First session
10:30 – 10:45Refreshment break
10:45 – 12:30Second session
12:30 – 13:30Lunch and networking
13:30 – 15:00Third session
15:00 – 15:15Refreshment break
15:15 – 16:30Workshop and daily review

Live online deliveries follow the same structure in East Africa Time, with shorter screen blocks and longer breaks.

What the fee includes

  • Instruction by a practitioner facilitator
  • Full course workbook and materials
  • Exercise files, templates and case studies
  • Refreshments and lunch on classroom deliveries
  • Certificate of completion
  • Post-course application plan

Frequently asked questions

Participants need basic familiarity with public health, health reporting or emergency operations. Advanced epidemiology, statistical software and field deployment experience are not required.

Participants should bring a laptop capable of opening spreadsheet and document files. Where permitted, they may also bring non-sensitive examples of their current reporting forms, surveillance indicators or preparedness plans.

The course suits public health officers, epidemiologists, health information staff, emergency coordinators, humanitarian health managers and disease control personnel. It is designed for professionals who must collect, interpret or act on emergency health information.

Outbreak investigation is one component of this programme. The course also addresses rapid assessments, mortality monitoring, emergency reporting architecture, alert management, coordination and preparedness for disaster settings.

Participants leave with templates and a completed surveillance plan that can be adapted to their agency, district, programme or deployment context. The tools support preparedness planning as well as live incident response.

Each training day runs from 08:30 to 16:30 and provides about 6.5 contact hours. The first week establishes assessment, surveillance design and analysis skills; the second week develops alert management, investigation, reporting, coordination and the final capstone.

Questions about this course?

Ask about dates, fees, group bookings or running it for your team. Our training team replies by email.