GIS Applications in Public Health Training Course

Duration 10 days 21 modules · 65 contact hours
Level Intermediate Certificate on completion
Who attends Public Health Analyst, Epidemiologist and others
Fee from USD 2,200 KSh 190,000 for Kenyan organisations
Where 52 cities + online See dates by city
Next start 16 Nov 2026 Course code SD-PH-054

Before you join: Participants should understand basic public health concepts such as incidence, prevalence, population denominators and health service delivery.

Dates & prices

Two start dates a month in every city, and live online on weekdays or weekends. Fees are per participant; classroom fees include tuition, materials, lunch and refreshments, and the certificate.

Suggest a date or city

Showing the next six months. Later dates, other cities and private deliveries for your team are available on request.

Course overview

Public health teams need to turn case records, service data, environmental measures and population statistics into defensible geographic evidence. Decisions about outbreak response, vaccination sites, maternal health outreach, ambulance coverage and environmental health controls depend on knowing where risk is concentrated, which communities face access barriers and whether interventions reach intended populations. Poorly designed maps, unsuitable denominators or weak privacy controls can misdirect resources and expose sensitive health information.

This course teaches participants to design, build and interpret public health GIS analyses using vector, raster, tabular and spatially referenced health data. Participants learn spatial data preparation, geocoding, address matching, rate calculation, choropleth mapping, service-area analysis, disease clustering, hotspot detection, environmental exposure analysis and equity-focused access assessment. The course also addresses metadata, data quality, confidentiality, suppression rules and communication of uncertainty to decision-makers.

Instruction combines short technical briefings with guided case work drawn from communicable disease surveillance, primary care planning, emergency response and environmental health. Participants work with realistic datasets to create maps, spatial analyses and decision products from the first week. They leave with a reusable public health GIS project pack, including a data specification, analysis workflow, map layouts, privacy checklist and intervention briefing. The final capstone requires participants to build, review and present a complete geographic analysis for a defined public health problem.

The course suits professionals who already work with health, population, service or location data and need stronger spatial analysis capability. It is relevant to public health agencies, hospitals, ministries, municipal health departments, NGOs, insurers and research teams responsible for population health decisions.

What you will be able to do

  • Prepare public health datasets for spatial analysis using documented quality-control procedures
  • Create disease rates, standardized indicators and thematic maps using appropriate denominators
  • Apply geocoding, address matching and coordinate reference system selection to health records
  • Conduct service-area and travel-time analyses for health facility access planning
  • Identify spatial clusters using hotspot analysis, spatial autocorrelation and epidemiological interpretation
  • Assess environmental exposure patterns using buffers, overlays and raster suitability methods
  • Apply confidentiality, aggregation and suppression controls to mapped health information
  • Produce a defensible public health GIS briefing with maps, methods and recommendations

Benefits of attending

For you

  • Build credible disease and service-access maps for public health decision meetings
  • Apply spatial statistics without overstating patterns or causal conclusions
  • Handle sensitive location data using practical confidentiality and suppression controls
  • Translate GIS outputs into intervention priorities, briefing notes and operational actions
  • Develop a portfolio-ready public health GIS analysis and presentation

For your organisation

  • Improve geographic targeting of surveillance, prevention and outreach resources
  • Reduce misleading maps through consistent denominators, classifications and quality checks
  • Identify service gaps using travel-time, catchment and population coverage analysis
  • Strengthen governance for confidential health records with location information
  • Provide decision-makers with documented spatial evidence for funding and programme choices

Course modules

21 modules over 10 days

Participants can frame a public health question as a spatial analysis problem.

  • Public health decisions supported by location, population and service data
  • Spatial epidemiology concepts: place, person, time and population at risk
  • Vector, raster and tabular data roles in health analysis
  • Geographic scale effects: individual, neighbourhood, district and national reporting
  • Modifiable areal unit problem and implications for health indicators
  • Problem statements linking public health decisions to spatial evidence

Participants can select suitable spatial data models and coordinate reference systems.

  • Points, lines and polygons representing health events and service boundaries
  • Raster cells representing elevation, land cover, rainfall and exposure surfaces
  • Coordinate reference systems, datums and projected coordinate system selection
  • Latitude-longitude coordinates versus projected metres for distance measurement
  • Scale, resolution and positional accuracy in health mapping
  • Layer naming conventions and folder structures for reproducible projects

Participants can assess data sources and document fitness for intended analysis.

  • Routine surveillance records, registries, surveys and facility reporting systems
  • Census populations, administrative boundaries and small-area deprivation indicators
  • OpenStreetMap, satellite imagery and environmental monitoring data sources
  • ISO 19115 metadata elements for spatial health datasets
  • Data provenance, update frequency and collection-method limitations
  • Fitness-for-purpose assessment against the proposed public health question

Participants can clean and prepare location-linked health data for analysis.

  • Field profiling for missing values, duplicates and invalid geographic codes
  • Standardising dates, administrative names and categorical health variables
  • Validating geometry, repairing polygons and checking boundary topology
  • Detecting coordinate outliers with extent checks and visual inspection
  • Join keys, lookup tables and controlled geographic naming conventions
  • Documenting transformations in a reproducible data preparation log

Participants can geocode health records and evaluate match quality.

  • Address standardisation before geocoding patient, facility and event records
  • Batch geocoding workflows using reference addresses and locator services
  • Match scores, candidate review and unmatched-record resolution procedures
  • Manual correction rules for incomplete, ambiguous and informal addresses
  • Positional uncertainty recorded for geocoded health event locations
  • Aggregation alternatives when household-level coordinates are unavailable

Participants can apply privacy controls to geographic health information products.

  • Identifiability risks from household points, rare conditions and small counts
  • Minimum cell-size rules, suppression and secondary suppression methods
  • Aggregation, jittering and masking choices for public map publication
  • Data minimisation principles for location-linked health records
  • Role-based access controls and secure storage for sensitive datasets
  • Ethical review questions for mapping vulnerable and stigmatised populations

Participants can calculate geographically comparable public health indicators.

  • Crude rates calculated from events, population denominators and time periods
  • Age-specific rates and demographic composition effects on comparison
  • Direct age standardisation using a selected standard population
  • Indirect standardisation and standardised mortality ratio interpretation
  • Small-number instability, confidence intervals and rate smoothing rationale
  • Denominator alignment with case definitions and geographic boundaries

Participants can create interpretable thematic maps for public health audiences.

  • Choropleth maps using rates rather than raw event counts
  • Natural breaks, quantiles and equal intervals for classification
  • Sequential, diverging and categorical colour schemes for health variables
  • Proportional symbols and dot density for event distribution
  • Legends, titles, sources and north arrows supporting interpretation
  • Map layout review for accessibility, readability and decision relevance

Participants can combine health and contextual layers to answer location questions.

  • Attribute queries selecting cases by date, diagnosis and demographic characteristics
  • Spatial selection identifying events within administrative or service boundaries
  • Buffer analysis around hazards, facilities and incident locations
  • Intersect operations combining population, exposure and health outcome layers
  • Dissolve and clip tools preparing reporting-area datasets
  • Overlay result validation through counts, maps and boundary checks

Participants can map service locations and examine catchment patterns.

  • Facility inventories including service type, capacity and operating hours
  • Catchment areas derived from utilisation records and patient origins
  • Thiessen polygons for preliminary nearest-facility service territories
  • Facility-to-population ratios for comparing local service provision
  • Referral pathways mapped between community, primary and specialist services
  • Catchment limitations caused by roads, costs and patient preferences

Participants can model travel-based access to health services.

  • Road network preparation with travel speeds, restrictions and connectivity
  • Service areas calculated by travel time from health facilities
  • Origin-destination matrices measuring journeys from populations to services
  • Closest-facility analysis for emergency, maternal and vaccination services
  • Two-step floating catchment area method for spatial accessibility
  • Interpreting access results alongside affordability, acceptability and availability

Participants can describe disease distributions without making unsupported inferences.

  • Point pattern maps distinguishing cases, rates and reporting locations
  • Kernel density estimation for visualising concentrated event patterns
  • Nearest-neighbour index for assessing point clustering patterns
  • Spatial autocorrelation concepts: similarity among nearby geographic areas
  • Global Moran's I interpretation for area-based health indicators
  • Ecological fallacy and cautious interpretation of area-level associations

Participants can identify and communicate statistically significant spatial clusters.

  • Getis-Ord Gi* hotspot analysis for local concentration detection
  • Local Moran's I clusters and spatial outlier interpretation
  • Neighbour definitions using contiguity, distance bands and k-nearest neighbours
  • Permutation testing, p-values and multiple-testing caution
  • Temporal windows for detecting changing outbreak locations
  • Cluster investigation briefings separating signals from confirmed causes

Participants can assess potential environmental exposures using spatial analysis methods.

  • Buffer zones around industrial sites, water sources and transport corridors
  • Land-use regression inputs for estimating environmental exposure patterns
  • Raster reclassification for hazard severity and exposure scoring
  • Weighted overlay models combining environmental and population vulnerability factors
  • Remote sensing indicators supporting heat, vegetation and flood assessment
  • Exposure maps interpreted with measurement uncertainty and temporal variation

Participants can analyse geographic inequities in health outcomes and service access.

  • Deprivation indices mapped alongside health outcomes and service coverage
  • Equity stratifiers including age, disability, income and rurality
  • Bivariate maps comparing need, access and intervention reach
  • Priority areas identified through need-capacity gap analysis
  • Community assets mapped alongside risks and service deficits
  • Equity interpretations avoiding deficit narratives and inappropriate labelling

Participants can incorporate time into geographic surveillance and response analysis.

  • Time-enabled layers displaying cases, alerts and interventions chronologically
  • Epidemic curves linked to mapped locations and reporting periods
  • Space-time cubes summarising events by place and interval
  • Seasonal patterns compared across districts and population groups
  • Data latency assessment for near-real-time surveillance reporting
  • Situation maps distinguishing onset date, notification date and report date

Participants can build raster-based models for public health planning questions.

  • Raster resolution selected for available data and decision scale
  • Euclidean distance surfaces measuring proximity to hazards or facilities
  • Cost-distance analysis incorporating terrain, land cover and travel barriers
  • Raster calculator expressions combining standardised planning criteria
  • Multi-criteria decision analysis with documented weighting assumptions
  • Suitability outputs tested through sensitivity analysis and stakeholder review

Participants can plan secure GIS information products for operational use.

  • Web map design for authorised operational and public audiences
  • Dashboard indicators linking maps, charts, filters and alert thresholds
  • Field data forms capturing location, observations and validation rules
  • Offline collection workflows for remote health and humanitarian settings
  • User permissions controlling editing, viewing and data download access
  • Publication checks for privacy, metadata and map refresh schedules

Participants can present GIS findings with clear methods, limitations and recommendations.

  • Decision-focused map selection for executives, clinicians and community stakeholders
  • Methods statements describing data sources, dates and analytical choices
  • Uncertainty communication using confidence intervals, caveats and annotations
  • Recommendations linked explicitly to geographic findings and operational constraints
  • Map critique criteria covering accuracy, clarity, equity and confidentiality
  • Briefing structures for outbreak response, service planning and funding decisions

Participants can plan and quality-assure a public health GIS project.

  • Project charter defining decision owner, question, scope and outputs
  • Analysis plan specifying datasets, methods, assumptions and acceptance criteria
  • Data dictionary documenting fields, definitions, sources and update cycles
  • Quality assurance checks for joins, projections, calculations and layouts
  • Peer review protocol for analytical validity and privacy compliance
  • Version control practices for datasets, scripts, maps and reports

Participants can build, review and present a complete GIS analysis addressing a defined public health decision.

  • Define a decision question, population, geography and intervention context
  • Prepare source data using documented quality, geocoding and privacy controls
  • Calculate indicators and select methods suited to the decision question
  • Build maps and spatial analyses supporting defensible findings
  • Review outputs against analytical, ethical and communication quality criteria
  • Present a decision briefing with recommendations, limitations and next actions

Exercises and examples are adapted to each cohort's sectors and roles.

What you take back to work

  1. Public health GIS project charter template
  2. Spatial health data quality checklist
  3. Confidentiality and map publication checklist
  4. Service-access analysis workflow
  5. Disease mapping and cluster analysis model
  6. Public health GIS decision briefing template

Who should attend

  • Public Health Analyst — needs geographic evidence for surveillance, planning and intervention decisions
  • Epidemiologist — requires spatial methods to investigate disease distribution and clustering
  • Health Information Manager — manages location-linked datasets requiring quality and confidentiality controls
  • Programme Manager — needs maps and access analyses to target services and monitor coverage
  • Environmental Health Officer — assesses place-based exposure, hazards and affected populations
  • Health Research Officer — integrates geographic variables into population health studies

Skills and tools covered

Spatial health analysisDisease mappingService access modellingHealth data governanceGeocoding and matchingGIS decision communication

Tools and standards

QGIS, ArcGIS Pro, ArcGIS Online, ISO 19115

How the course runs

Training methodology

The course uses short instructor briefings followed by guided software demonstrations, case-based analysis and structured group review. Participants work through public health scenarios involving outbreak mapping, facility access, environmental exposure and health equity. Individual tasks build a reusable GIS project from data intake through map production and interpretation. Trainers use peer critique to test map clarity, analytical assumptions and confidentiality controls. The final sessions use an applied capstone simulation in which participants prepare and present a geographic evidence product for decision-makers.

Requirements and prerequisites

Participants should understand basic public health concepts such as incidence, prevalence, population denominators and health service delivery. Experience working with spreadsheets, health records, survey data or routine monitoring data is expected. Participants should be comfortable using a desktop computer and interpreting tables and charts. Prior GIS experience is useful but not required; the course introduces essential spatial concepts before advanced analysis. Programming, database administration, advanced statistics and prior use of QGIS or ArcGIS Pro are not required. Participants benefit most by bringing a current workplace question or anonymised data structure.

A typical training day

08:30 – 10:30First session
10:30 – 10:45Refreshment break
10:45 – 12:30Second session
12:30 – 13:30Lunch and networking
13:30 – 15:00Third session
15:00 – 15:15Refreshment break
15:15 – 16:30Workshop and daily review

Live online deliveries follow the same structure in East Africa Time, with shorter screen blocks and longer breaks.

What the fee includes

  • Instruction by a practitioner facilitator
  • Full course workbook and materials
  • Exercise files, templates and case studies
  • Refreshments and lunch on classroom deliveries
  • Certificate of completion
  • Post-course application plan

Frequently asked questions

You do not need prior GIS software experience. You should understand basic public health measures and be comfortable working with spreadsheets, tables and routine health data.

Bring a laptop if attending in person, plus a current workplace question if possible. You may also bring an anonymised data structure or sample report, subject to your organisation's information-governance rules.

The course is designed for public health analysts, epidemiologists, health information staff, programme managers and environmental health professionals. It also suits researchers who need to add geographic analysis to population health studies.

General GIS courses focus on generic mapping and spatial data operations. This course applies those methods to epidemiology, health service access, confidentiality, denominators, disease clusters and public health decision briefings.

Participants can use the methods for outbreak maps, facility catchments, vaccination access, environmental exposure reviews and equity assessments. The templates support a repeatable workflow for future public health GIS assignments.

The first week establishes spatial data preparation, health indicators, mapping and service-access methods. The second week covers cluster detection, exposure and equity analysis, operational products, project assurance and the capstone presentation.

Questions about this course?

Ask about dates, fees, group bookings or running it for your team. Our training team replies by email.